Shi Xueping

With poplar and Arabidopsis as the main research materials, Dr. Shi Xueping uses technologies of molecular biology, bioinformatics and functional genomics to study the regulatory mechanisms of plant peptide hormones and miRNAs in the determination and differentiation of vascular cambium. Shi hosts 3 projects of the National Natural Science Foundation of China, and the research results were published in Briefings in Bioinformatics, Science of Total Environment, Current Biology, Horticulture Research and other journals. She lectures for undergraduates and postgraduates on “Molecular Cloning Techniques in Forest Trees”, “R for Scientific Plotting”, “Tree Breeding”, “Experimental Design and Data Analysis”, “Experiment of Tree Molecular Biology” and “Practical Course–Forest Tree Breeding and Cultivation”.

[1] 2004.9-2009.6 Huazhong Agricultural University > PhD Landscape Plants & Ornamental Horticulture
[2] 2000.9-2004.7 Huazhong Agricultural University > BS Forestry
[3] 2001.9-2004.7 Huazhong University of Science and Technology > BS English

[1] 2012.12-present > Huazhong Agricultural University > Associate Professor
[2] 2016.12-2017.12 > University of Helsinki > Visiting Scholar
[3] 2009.7-2011.12 > Huazhong Agricultural University > Lecturer

1. Liu YY, Yang QF, Li Z, Zhou ZX, Shi XP* and Wang YJ: Parallel genetic and phenotypic differentiation of Erigeron annuus invasion in China. Frontiers in Plant Science 2023, 13:994367. doi: 10.3389/fpls.2022.994367
2. Shi QF, Tian DD, Wang JY, Chen AL, Miao YQ, Chen YM, Li J, Wu XM, Zheng B, Guo WW, Shi XP*: Overexpression of miR390b promotes stem elongation and height growth in Populus. Horticulture Research 2023, 10: uhac258.
3. Zhang Z, Zhu MM, Xie Q, Larkin RM, Shi XP*, Zheng B*. CProtMEDIAS: clustering of amino acid sequences encoded by gene families by MErging and DIgitizing Aligned Sequences. Briefings in Bioinformatics 2022, 23(4): 1-10.
4. Ahmed U, Xie Q, Shi XP*, Zheng B*. Development of reference genes for horticultural plants. Critical Reviews in Plant Sciences 2022, 41(3): 190-208.
5. Shi XP#, Bai YF#, Song P, Liu YY, Zhang ZW, Zheng B, Jiang CQ*, Wang YJ*: Clonal integration and phosphorus management under light heterogeneity facilitate the growth and diversity of understory vegetation and soil fungal communities. Science of Total Environment 2021, 767: 144322. （JCR分区：Q1区）（论文被引次数：1，期刊JCR分区：ENVIRONMENTAL SCIENCES Q1区、期刊类别排序：25/274、期刊5年影响因子：7.842）
6. Tian DD, Tang JW, Luo LW, Zhang Z, Du KB, Larkin RM, Shi XP* and Zheng B*: Influence of switchgrass TDIF-like genes on Arabidopsis vascular development. Frontiers in Plant Science 2021, 12: 737219. （JCR分区：Q1区）（论文被引次数：0，期刊JCR分区：PLANT SCIENCES Q1区、期刊类别排序：17/235、期刊5年影响因子：6.612）
7. Ahmed U, Rao MJ, Qi C, Xie Q, Noushahi HA, Yaseen M, Shi XP*, Zheng B*: Expression profiling of flavonoid biosynthesis genes and secondary metabolites accumulation in Populus under drought stress. Molecules 2021, 26 (18): 5546. （JCR分区：Q2区）（论文被引次数：1，期刊JCR分区：BIOCHEMISTRY & MOLECULAR BIOLOGY Q2区、期刊类别排序：115/295、期刊5年影响因子：4.588）
8. Zhao CY, Liu YY, Shi XP, Wang YJ: Effects of soil nutrient variability and competitor identify on growth and co-existence among invasive alien and native clonal plants. Environmental Pollution 2020, 261: 113894.
9. Zhang Z, Liu L, Kucukoglu M, Tian DD, Larkin RM, Shi XP*, Zheng B*: Predicting and clustering plant CLE genes with a new method developed specifically for short amino acid sequences. BMC genomics 2020, 21 (1): 709. （JCR分区：Q2区）（论文被引次数：3，期刊JCR分区：BIOTECHNOLOGY & APPLIED MICROBIOLOGY Q2区、期刊类别排序：58/159、期刊5年影响因子：4.478）（利用实验室自主开发的方法对植物界的CLE基因进行了全面预测。）
10. Alonso-Serra J*, Shi XP, Peaucelle A, Rastas P, Bourdon M, Immanen J, Takahashi J, Koivula H, Eswaran G, Muranen S, Help H, Smolander OP, Su C, Safronov O, Gerber L, Salojärvi J, Hagqvist R, Mähönen AP, Helariutta Y*, Nieminen K*: ELIMAKI locus is required for vertical proprioceptive response in birch trees. Current Biology 2020, 30 (4): 589-599.
11. Tian DD, Liu YY, Tian LD, Wan MJ, Zheng B, Shi XP*: Involvement of Populus CLEL peptides in root development. Tree Physiology 2019, 39 (11): 1907-1921. （JCR分区：Q1区）（论文被引次数：2，期刊JCR分区：FORESTRY Q1区、期刊类别排序：4/67、期刊5年影响因子：4.727）（发现了CLEL多肽对植物根系发育具有功能保守性和物种特异性。）
12. Zhang P, Su ZQ, Xu L, Shi XP, Du KB, Zheng B, Wang YJ: Effects of fragment traits, burial orientation and nutrient supply on survival and growth in Populus deltoides × P. simonii. Scientific Reports 2016, 6: 21031.
13. Wang YJ, Shi XP, Wu XJ, Meng XF, Wang PC, Zhou ZX, Luo FL, Yu FH: Effects of patch contrast and arrangement on benefits of clonal integration in a rhizomatous clonal plant. Scientific Reports 2016, 6: 35459.
14. Wang YJ, Shi XP, Meng XF, Wu XJ, Luo FL, Yu FH: Effects of spatial patch arrangement and scale of covarying resources on growth and intraspecific competition of a clonal plant. Frontiers in Plant Science 2016, 7:753.
15. Shi XP, Zhang CJ, Liu QH, Zhang Z, Zheng B*, Bao MZ*: De novo comparative transcriptome analysis provides new insights into sucrose induced somatic embryogenesis in camphor tree (Cinnamomum camphora L.). BMC genomics 2016, 17 (1): 26. （首次为樟树提供了大规模的基因资源）
16. Liu QH, Zhang CJ, Cheng YH, Zheng B, Bao MZ, Shi XP*: Molecular cloning, characterization, and functional analysis of CcBBM gene from camphor tree (Cinnamomum camphora L.). Trees 2016, 30 (4): 1033-1043.
17. Wang YJ, Shi XP, Zhong ZC: The relative importance of sexual reproduction and clonal propagation in rhizomatous herb Iris japonica Thunb. from two habitats of Jinyun Mountain, Southwest China. Russian Journal of Ecology 2013, 44 (3): 199-206.
18. Wang YJ, Li QY, Shi XP, Tao JP: Effects of dwarf bamboo, Fargesia nitida (Mitford) Keng f. ex Yi, on bark stripping by ungulates in a subalpine Abies faxoniana Rehder & E. H. Wilson forest, southwest China. Contemporary Problems of Ecology 2013, 6 (5): 578-582.
19. Chen F, Yuan W, Shi XP, Ye YM: Evaluation of pollen viability, stigma receptivity and fertilization success in Lagerstroemia indica L.. African Journal of Biotechnology 2013, 12(46): 6460-6467
20. Wang YJ, Shi XP, Zhong ZC: Clonal diversity and genetic differentiation in rhizomatous herb, Iris japonica (Iridaceae) populations on Jinyun Mountain, southwest China. Sains Malays 2012, 41 (2): 149-154.
21. Wang YJ, Shi XP, Peng Y, Zhong ZC, Tao JP: Effects of fine-scale pattern of dwarf bamboo on understory species diversity in Abies faxoniana Forest, southwest, China. Sains Malays 2012, 41 (6): 649-657.
22. Bao Y, Liu GF, Shi XP, Xing W, Ning GG, Liu J, Bao MZ: Primary and repetitive secondary somatic embryogenesis in Rosa hybrida ‘Samantha’. Plant Cell Tiss Organ Cult 2012, 109 (3): 411-418.
23. Zhang JQ, Liu GF, Guo C, He YH, Li ZN, Ning GG, Shi XP, Bao MZ: The FLOWERING LOCUS T orthologous gene of Platanus acerifolia is expressed as alternatively spliced forms with distinct spatial and temporal patterns. Plant Biology 2011, 13 (5): 809-820.
24. Ye YM*, Tong J, Shi XP, Yuan W, Li GR: Morphological and cytological studies of diploid and colchicine-induced tetraploid lines of crape myrtle (Lagerstroemia indica L.). Scientia Horticulturae 2010, 124 (1): 95-101.
25. Shi XP, Dai XG, Liu GF, Zhang JW, Ning GG, Bao MZ: Cyclic secondary somatic embryogenesis and efficient plant regeneration in camphor tree (Cinnamomum camphora L.). In Vitro Cell Dev Biol-Pl 2010, 46 (2): 117-125.
26. Shi XP, Dai XG, Liu GF, Bao MZ: Enhancement of somatic embryogenesis in camphor tree (Cinnamomum camphora L.): osmotic stress and other factors affecting somatic embryo formation on hormone-free medium. Trees 2009, 23 (5): 1033-1042.
27. Ning GG, Shi XP, Hu HR, Yan Y, Bao MZ: Development of a range of polyploid lines in Petunia hybrida and the relationship of ploidy with the single-/double-flower trait. Hortscience 2009, 44 (2): 250-255.
28. Dai XG, Shi XP, Ye YM, Fu Q, Bao MZ: High frequency plant regeneration from cotyledon and hypocotyl explants of ornamental kale. Biologia Plantarum 2009, 53 (4): 769-773.
29. Dai XG, Shi XP, Fu Q, Bao MZ: Improvement of isolated microspore culture of ornamental kale (Brassica oleracea var. acephala): effects of sucrose concentration, medium replacement, and cold pre-treatment. Journal of Horticultural Science & Biotechnology 2009, 84 (5): 519-525.
30. 戴希刚，施雪萍，包满珠. 基因型与培养条件对羽衣甘蓝小孢子胚胎发生的影响. 植物生理学报，2012，48（11）：1113-1119.
31. 戴希刚，施雪萍，包满珠. 羽衣甘蓝小孢子胚植株再生的影响因素分析. 西北农林科技大学学报，2013，41（7）：201-208.